Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AL590787.1-201ENST00000568856 1315 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 ACTG1P4-201ENST00000425123 1122 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 CXCL1P1-201ENST00000502804 216 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AC027612.4-201ENST00000605371 583 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AC091812.2-201ENST00000619081 385 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AL512652.2-201ENST00000625156 1716 ntBASIC15.28■□□□□ 0.04
CCDC71Q8IV32 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC71Q8IV32 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 AC112504.1-201ENST00000623415 1841 ntBASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CCDC71Q8IV32 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 PPT1-215ENST00000641471 2368 ntBASIC15.27■□□□□ 0.03
CCDC71Q8IV32 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms