Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 HAUS4P1-201ENST00000406739 1145 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 AL512356.2-201ENST00000546955 174 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 BANF1P1-201ENST00000553684 263 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 MIR4453-201ENST00000584019 89 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 KRT18P28-201ENST00000453838 1332 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 CDC14C-201ENST00000428251 1719 ntBASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CBWD2Q8IUF1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 METTL21AP1-201ENST00000438852 635 ntBASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 AC003101.2-201ENST00000612557 442 ntBASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 Z92544.3-201ENST00000624747 417 ntBASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 AC069224.1-201ENST00000566372 1715 ntBASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CBWD2Q8IUF1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 LINC02447-202ENST00000501888 2146 ntBASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 AL136982.4-201ENST00000437689 1740 ntBASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 AC092183.1-201ENST00000469884 875 ntBASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.59■□□□□ 0.41
CBWD2Q8IUF1 AC004449.1-201ENST00000564240 433 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms