Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 AC068472.1-201ENST00000474589 881 ntBASIC16.45■□□□□ 0.22
PACS2Q86VP3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.45■□□□□ 0.22
PACS2Q86VP3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 AC016027.1-202ENST00000607927 1699 ntBASIC16.45■□□□□ 0.22
PACS2Q86VP3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 AL691447.1-201ENST00000419456 387 ntBASIC16.44■□□□□ 0.22
PACS2Q86VP3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 MTCL1P1-201ENST00000446207 792 ntBASIC16.44■□□□□ 0.22
PACS2Q86VP3 KRT17P6-201ENST00000453795 1220 ntBASIC16.44■□□□□ 0.22
PACS2Q86VP3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 AC074051.2-201ENST00000565115 352 ntBASIC16.44■□□□□ 0.22
PACS2Q86VP3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.44■□□□□ 0.22
PACS2Q86VP3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PACS2Q86VP3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.44■□□□□ 0.22
PACS2Q86VP3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PACS2Q86VP3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 NFIC-211ENST00000641145 8399 ntBASIC16.43■□□□□ 0.22
PACS2Q86VP3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PACS2Q86VP3 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 AC027612.1-201ENST00000445234 2395 ntBASIC16.43■□□□□ 0.22
PACS2Q86VP3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 PKD1P5-201ENST00000532415 10291 ntBASIC16.43■□□□□ 0.22
PACS2Q86VP3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PACS2Q86VP3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PACS2Q86VP3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PACS2Q86VP3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms