Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 BASP1P1-201ENST00000430708 665 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 HMGN1P19-201ENST00000436976 333 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AC027369.6-201ENST00000525520 931 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AL390955.2-201ENST00000603032 514 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AL133215.2-201ENST00000609242 977 ntBASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRTM4Q86VH4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC092580.3-201ENST00000430932 139 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC011467.4-201ENST00000594891 528 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AL138828.2-201ENST00000615812 383 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AL390754.1-201ENST00000619088 582 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC008894.3-201ENST00000624324 3103 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 AC092364.2-201ENST00000596710 2692 ntBASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRTM4Q86VH4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
LRRTM4Q86VH4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms