Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 TFAMP1-201ENST00000412727 736 ntBASIC16.24■□□□□ 0.19
LDB1Q86U70 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.24■□□□□ 0.19
LDB1Q86U70 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LDB1Q86U70 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LDB1Q86U70 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LDB1Q86U70 AC112504.1-201ENST00000623415 1841 ntBASIC16.24■□□□□ 0.19
LDB1Q86U70 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LDB1Q86U70 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB1Q86U70 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB1Q86U70 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LDB1Q86U70 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.23■□□□□ 0.19
LDB1Q86U70 YBX2P1-201ENST00000394192 760 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.23■□□□□ 0.19
LDB1Q86U70 AC004832.2-201ENST00000426397 482 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 ADH5P3-201ENST00000433842 1137 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 KRT8P48-201ENST00000515599 1220 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
LDB1Q86U70 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.23■□□□□ 0.19
LDB1Q86U70 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.23■□□□□ 0.19
LDB1Q86U70 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 FOXO1B-201ENST00000504678 1527 ntBASIC16.23■□□□□ 0.19
LDB1Q86U70 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
LDB1Q86U70 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LDB1Q86U70 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 AC069224.1-201ENST00000566372 1715 ntBASIC16.22■□□□□ 0.19
LDB1Q86U70 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LDB1Q86U70 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LDB1Q86U70 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms