Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 AC020916.1-201ENST00000587762 1774 ntBASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SWSAP1Q6NVH7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 AC245100.5-201ENST00000452108 331 ntBASIC18■□□□□ 0.47
SWSAP1Q6NVH7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ZNF890P-202ENST00000530367 1156 ntBASIC18■□□□□ 0.47
SWSAP1Q6NVH7 AC135586.1-201ENST00000539323 574 ntBASIC18■□□□□ 0.47
SWSAP1Q6NVH7 MIR6069-201ENST00000620069 79 ntBASIC18■□□□□ 0.47
SWSAP1Q6NVH7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18■□□□□ 0.47
SWSAP1Q6NVH7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 AC006449.6-201ENST00000612330 2296 ntBASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 AC004987.2-201ENST00000395959 1148 ntBASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 SPTLC1P1-201ENST00000447199 261 ntBASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms