Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.59■□□□□ 0.57
USH1GQ495M9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USH1GQ495M9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 AC010336.2-201ENST00000564226 506 ntBASIC18.59■□□□□ 0.57
USH1GQ495M9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
USH1GQ495M9 AC004840.1-201ENST00000636359 365 ntBASIC18.59■□□□□ 0.57
USH1GQ495M9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
USH1GQ495M9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.59■□□□□ 0.57
USH1GQ495M9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USH1GQ495M9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
USH1GQ495M9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.58■□□□□ 0.57
USH1GQ495M9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.58■□□□□ 0.57
USH1GQ495M9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.58■□□□□ 0.57
USH1GQ495M9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 KRT8P12-202ENST00000472924 1397 ntBASIC18.58■□□□□ 0.57
USH1GQ495M9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
USH1GQ495M9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USH1GQ495M9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.58■□□□□ 0.56
USH1GQ495M9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
USH1GQ495M9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.58■□□□□ 0.56
USH1GQ495M9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.58■□□□□ 0.56
USH1GQ495M9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.58■□□□□ 0.56
USH1GQ495M9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.58■□□□□ 0.56
USH1GQ495M9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.58■□□□□ 0.56
USH1GQ495M9 AC009118.2-201ENST00000613275 655 ntBASIC18.58■□□□□ 0.56
USH1GQ495M9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
USH1GQ495M9 CYP4F24P-201ENST00000586049 1580 ntBASIC18.58■□□□□ 0.56
USH1GQ495M9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USH1GQ495M9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.58■□□□□ 0.56
USH1GQ495M9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
USH1GQ495M9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.58■□□□□ 0.56
USH1GQ495M9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USH1GQ495M9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.57■□□□□ 0.56
USH1GQ495M9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.57■□□□□ 0.56
USH1GQ495M9 AC044860.1-202ENST00000559481 777 ntBASIC18.57■□□□□ 0.56
USH1GQ495M9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.57■□□□□ 0.56
USH1GQ495M9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.57■□□□□ 0.56
USH1GQ495M9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
USH1GQ495M9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USH1GQ495M9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
USH1GQ495M9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
USH1GQ495M9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USH1GQ495M9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.57■□□□□ 0.56
USH1GQ495M9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USH1GQ495M9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USH1GQ495M9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms