Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AP001160.2-201ENST00000596071 487 ntBASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AC018529.1-201ENST00000613063 361 ntBASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AP001059.3-201ENST00000619053 235 ntBASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 AP001282.1-201ENST00000531301 1499 ntBASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PRICKLE4Q2TBC4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 HLA-J-203ENST00000494367 1087 ntBASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 AL691432.1-201ENST00000596308 1422 ntBASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PRICKLE4Q2TBC4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.07■□□□□ 0
PRICKLE4Q2TBC4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms