Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO1Q2MKA7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 AL136982.4-201ENST00000437689 1740 ntBASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 UXT-AS1-201ENST00000590504 1525 ntBASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO1Q2MKA7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 AC004461.1-201ENST00000412461 403 ntBASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 UPF3AP3-201ENST00000420996 769 ntBASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 RNA5SP410-201ENST00000516285 106 ntBASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO1Q2MKA7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 AC010327.4-202ENST00000591484 748 ntBASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RSPO1Q2MKA7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
RSPO1Q2MKA7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RSPO1Q2MKA7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms