Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC245884.6-201ENST00000515672 1067 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 EEF1DP1-201ENST00000585891 896 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 RN7SL725P-201ENST00000606439 259 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AHCYP2-201ENST00000430630 1300 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 AC104982.3-201ENST00000581995 514 ntBASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 AL353726.2-201ENST00000623259 884 ntBASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 PP12613-201ENST00000424958 2230 ntBASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO4Q2I0M5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 MIR4741-201ENST00000579822 90 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 NDUFV2P1-201ENST00000596415 907 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 AC091812.3-201ENST00000621362 345 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 CU633904.3-201ENST00000624042 1029 ntBASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RSPO4Q2I0M5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms