Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SCN1BQ07699 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCN1BQ07699 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.57□□□□□ -0.08
SCN1BQ07699 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.57□□□□□ -0.08
SCN1BQ07699 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SCN1BQ07699 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCN1BQ07699 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SCN1BQ07699 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SCN1BQ07699 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
SCN1BQ07699 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SCN1BQ07699 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.57□□□□□ -0.08
SCN1BQ07699 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SCN1BQ07699 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.56□□□□□ -0.08
SCN1BQ07699 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.56□□□□□ -0.08
SCN1BQ07699 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.56□□□□□ -0.08
SCN1BQ07699 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 BNIP3P18-201ENST00000593976 575 ntBASIC14.56□□□□□ -0.08
SCN1BQ07699 AC092329.2-201ENST00000598402 547 ntBASIC14.56□□□□□ -0.08
SCN1BQ07699 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.56□□□□□ -0.08
SCN1BQ07699 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 AL109954.1-202ENST00000564051 2148 ntBASIC14.56□□□□□ -0.08
SCN1BQ07699 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SCN1BQ07699 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.56□□□□□ -0.08
SCN1BQ07699 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.56□□□□□ -0.08
SCN1BQ07699 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.55□□□□□ -0.08
SCN1BQ07699 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.55□□□□□ -0.08
SCN1BQ07699 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC097637.2-201ENST00000624096 1997 ntBASIC14.55□□□□□ -0.08
SCN1BQ07699 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SCN1BQ07699 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SCN1BQ07699 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.55□□□□□ -0.08
SCN1BQ07699 NUS1P2-201ENST00000417358 873 ntBASIC14.55□□□□□ -0.08
SCN1BQ07699 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.55□□□□□ -0.08
SCN1BQ07699 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.55□□□□□ -0.08
SCN1BQ07699 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.55□□□□□ -0.08
SCN1BQ07699 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SCN1BQ07699 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.55□□□□□ -0.08
SCN1BQ07699 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms