Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.35■■□□□ 1.01
COL16A1Q07092 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
COL16A1Q07092 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC21.35■■□□□ 1.01
COL16A1Q07092 WDR7-208ENST00000589935 544 ntTSL 4 BASIC21.35■■□□□ 1.01
COL16A1Q07092 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.35■■□□□ 1.01
COL16A1Q07092 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.35■■□□□ 1.01
COL16A1Q07092 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.35■■□□□ 1.01
COL16A1Q07092 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.35■■□□□ 1.01
COL16A1Q07092 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL16A1Q07092 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.35■■□□□ 1.01
COL16A1Q07092 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL16A1Q07092 LETM1P2-201ENST00000597330 2178 ntBASIC21.35■■□□□ 1.01
COL16A1Q07092 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
COL16A1Q07092 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 PDIA3P2-201ENST00000428073 158 ntBASIC21.34■■□□□ 1.01
COL16A1Q07092 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.34■■□□□ 1.01
COL16A1Q07092 AC019193.1-201ENST00000506678 823 ntBASIC21.34■■□□□ 1.01
COL16A1Q07092 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.34■■□□□ 1.01
COL16A1Q07092 AC244157.2-201ENST00000616239 1006 ntBASIC21.34■■□□□ 1.01
COL16A1Q07092 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
COL16A1Q07092 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 CROCCP2-202ENST00000412962 2773 ntBASIC21.34■■□□□ 1.01
COL16A1Q07092 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.34■■□□□ 1.01
COL16A1Q07092 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL16A1Q07092 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.33■■□□□ 1.01
COL16A1Q07092 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC21.33■■□□□ 1.01
COL16A1Q07092 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.33■■□□□ 1.01
COL16A1Q07092 AC073413.1-201ENST00000603927 732 ntBASIC21.33■■□□□ 1.01
COL16A1Q07092 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
COL16A1Q07092 AC100757.4-201ENST00000626934 759 ntBASIC21.33■■□□□ 1.01
COL16A1Q07092 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.33■■□□□ 1.01
COL16A1Q07092 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.33■■□□□ 1.01
COL16A1Q07092 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.33■■□□□ 1.01
COL16A1Q07092 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL16A1Q07092 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
COL16A1Q07092 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.33■■□□□ 1.01
COL16A1Q07092 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.33■■□□□ 1
COL16A1Q07092 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL16A1Q07092 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL16A1Q07092 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COL16A1Q07092 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL16A1Q07092 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1
COL16A1Q07092 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
COL16A1Q07092 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
COL16A1Q07092 RN7SL48P-201ENST00000579283 293 ntBASIC21.33■■□□□ 1
COL16A1Q07092 PPY2P-201ENST00000582808 702 ntBASIC21.33■■□□□ 1
COL16A1Q07092 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL16A1Q07092 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.33■■□□□ 1
COL16A1Q07092 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.32■■□□□ 1
COL16A1Q07092 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
COL16A1Q07092 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21.32■■□□□ 1
COL16A1Q07092 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.32■■□□□ 1
COL16A1Q07092 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL16A1Q07092 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.32■■□□□ 1
COL16A1Q07092 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL16A1Q07092 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.31■■□□□ 1
COL16A1Q07092 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL16A1Q07092 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.31■■□□□ 1
COL16A1Q07092 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC21.31■■□□□ 1
COL16A1Q07092 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL16A1Q07092 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms