Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC092474.2-201ENST00000424288 719 ntBASIC15.7■□□□□ 0.1
HMGCS1Q01581 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC007967.2-201ENST00000432613 625 ntBASIC15.7■□□□□ 0.1
HMGCS1Q01581 KRT18P2-201ENST00000447938 1258 ntBASIC15.7■□□□□ 0.1
HMGCS1Q01581 KRT18P34-201ENST00000488218 1270 ntBASIC15.7■□□□□ 0.1
HMGCS1Q01581 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC034105.1-201ENST00000563488 319 ntBASIC15.7■□□□□ 0.1
HMGCS1Q01581 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCS1Q01581 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGCS1Q01581 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 AL078644.1-201ENST00000609881 752 ntBASIC15.69■□□□□ 0.1
HMGCS1Q01581 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HMGCS1Q01581 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGCS1Q01581 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC140658.5-201ENST00000438532 169 ntBASIC15.68■□□□□ 0.1
HMGCS1Q01581 RPL13AP23-201ENST00000480739 586 ntBASIC15.68■□□□□ 0.1
HMGCS1Q01581 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGCS1Q01581 KRT19P2-202ENST00000557173 1012 ntBASIC15.68■□□□□ 0.1
HMGCS1Q01581 AC145285.3-201ENST00000564603 959 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms