Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SEC61A1P61619 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 HLA-A-202ENST00000376806 1854 ntBASIC14.32□□□□□ -0.12
SEC61A1P61619 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
SEC61A1P61619 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.32□□□□□ -0.12
SEC61A1P61619 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.32□□□□□ -0.12
SEC61A1P61619 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.32□□□□□ -0.12
SEC61A1P61619 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.32□□□□□ -0.12
SEC61A1P61619 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 AL590787.1-201ENST00000568856 1315 ntBASIC14.32□□□□□ -0.12
SEC61A1P61619 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.32□□□□□ -0.12
SEC61A1P61619 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEC61A1P61619 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 AP002414.2-201ENST00000591780 3365 ntBASIC14.31□□□□□ -0.12
SEC61A1P61619 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SEC61A1P61619 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 KRT18P2-201ENST00000447938 1258 ntBASIC14.31□□□□□ -0.12
SEC61A1P61619 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.31□□□□□ -0.12
SEC61A1P61619 RNA5SP416-201ENST00000516838 111 ntBASIC14.31□□□□□ -0.12
SEC61A1P61619 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.31□□□□□ -0.12
SEC61A1P61619 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.31□□□□□ -0.12
SEC61A1P61619 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
SEC61A1P61619 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEC61A1P61619 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.31□□□□□ -0.12
SEC61A1P61619 FRMD8P1-201ENST00000440433 1524 ntBASIC14.31□□□□□ -0.12
SEC61A1P61619 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SEC61A1P61619 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEC61A1P61619 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.3□□□□□ -0.12
SEC61A1P61619 PI4KAP1-204ENST00000612579 1703 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms