Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 Z97205.2-201ENST00000564697 1639 ntBASIC14.05□□□□□ -0.16
HCFC1P51610 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HCFC1P51610 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.05□□□□□ -0.16
HCFC1P51610 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.05□□□□□ -0.16
HCFC1P51610 AC074044.1-201ENST00000609673 707 ntBASIC14.05□□□□□ -0.16
HCFC1P51610 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HCFC1P51610 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HCFC1P51610 CYP4F24P-201ENST00000586049 1580 ntBASIC14.05□□□□□ -0.16
HCFC1P51610 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.05□□□□□ -0.16
HCFC1P51610 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.05□□□□□ -0.16
HCFC1P51610 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
HCFC1P51610 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.05□□□□□ -0.16
HCFC1P51610 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.05□□□□□ -0.16
HCFC1P51610 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.05□□□□□ -0.16
HCFC1P51610 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.05□□□□□ -0.16
HCFC1P51610 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HCFC1P51610 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HCFC1P51610 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.04□□□□□ -0.16
HCFC1P51610 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 HTR7P1-202ENST00000624664 4411 ntBASIC14.04□□□□□ -0.16
HCFC1P51610 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.04□□□□□ -0.16
HCFC1P51610 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.04□□□□□ -0.16
HCFC1P51610 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 EEF1DP4-201ENST00000446006 880 ntBASIC14.04□□□□□ -0.16
HCFC1P51610 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 FAM8A2P-201ENST00000528813 1142 ntBASIC14.04□□□□□ -0.16
HCFC1P51610 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.04□□□□□ -0.16
HCFC1P51610 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HCFC1P51610 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HCFC1P51610 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.04□□□□□ -0.16
HCFC1P51610 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms