Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.86□□□□□ -0.03
NR4A2P43354 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.86□□□□□ -0.03
NR4A2P43354 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.86□□□□□ -0.03
NR4A2P43354 AC012640.2-201ENST00000561606 901 ntBASIC14.86□□□□□ -0.03
NR4A2P43354 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.86□□□□□ -0.03
NR4A2P43354 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.86□□□□□ -0.03
NR4A2P43354 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.86□□□□□ -0.03
NR4A2P43354 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A2P43354 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.86□□□□□ -0.03
NR4A2P43354 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NR4A2P43354 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 AC096633.1-201ENST00000422446 749 ntBASIC14.85□□□□□ -0.03
NR4A2P43354 AL591424.1-201ENST00000442569 1213 ntBASIC14.85□□□□□ -0.03
NR4A2P43354 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 AC105339.3-201ENST00000560043 636 ntBASIC14.85□□□□□ -0.03
NR4A2P43354 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.85□□□□□ -0.03
NR4A2P43354 FAM197Y3-203ENST00000618346 717 ntBASIC14.85□□□□□ -0.03
NR4A2P43354 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 AC107918.4-202ENST00000641623 219 ntBASIC14.85□□□□□ -0.03
NR4A2P43354 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A2P43354 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
NR4A2P43354 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A2P43354 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.84□□□□□ -0.03
NR4A2P43354 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NR4A2P43354 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR4A2P43354 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 AC068587.6-202ENST00000641839 5619 ntBASIC14.84□□□□□ -0.03
NR4A2P43354 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
NR4A2P43354 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A2P43354 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms