Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6BP35913 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
PDE6BP35913 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6BP35913 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6BP35913 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 AC243960.2-201ENST00000600996 747 ntBASIC19.82■□□□□ 0.76
PDE6BP35913 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.82■□□□□ 0.76
PDE6BP35913 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDE6BP35913 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6BP35913 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
PDE6BP35913 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
PDE6BP35913 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDE6BP35913 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 GPAA1P2-201ENST00000417923 928 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 GOLGA2P4-201ENST00000441462 777 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 AC012441.1-201ENST00000446669 685 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 AC245100.5-201ENST00000452108 331 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.81■□□□□ 0.76
PDE6BP35913 AC120045.2-201ENST00000567334 178 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 CLUHP6-201ENST00000580789 941 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDE6BP35913 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.81■□□□□ 0.76
PDE6BP35913 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PDE6BP35913 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6BP35913 GGT3P-204ENST00000453783 1664 ntBASIC19.81■□□□□ 0.76
PDE6BP35913 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6BP35913 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6BP35913 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 AC134312.5-201ENST00000568031 1313 ntBASIC19.8■□□□□ 0.76
PDE6BP35913 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE6BP35913 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.8■□□□□ 0.76
PDE6BP35913 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE6BP35913 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.8■□□□□ 0.76
PDE6BP35913 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 AL049840.4-201ENST00000602422 811 ntBASIC19.8■□□□□ 0.76
PDE6BP35913 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE6BP35913 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE6BP35913 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.8■□□□□ 0.76
PDE6BP35913 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE6BP35913 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms