Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT9P35527 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT9P35527 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT9P35527 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT9P35527 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT9P35527 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
KRT9P35527 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT9P35527 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT9P35527 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
KRT9P35527 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT9P35527 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT9P35527 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 VN2R19P-201ENST00000442399 1052 ntBASIC17.83■□□□□ 0.44
KRT9P35527 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 CXCL1P1-201ENST00000502804 216 ntBASIC17.83■□□□□ 0.44
KRT9P35527 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT9P35527 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT9P35527 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT9P35527 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
KRT9P35527 AL513477.1-201ENST00000602865 2407 ntBASIC17.83■□□□□ 0.44
KRT9P35527 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KRT9P35527 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT9P35527 AC016027.1-202ENST00000607927 1699 ntBASIC17.83■□□□□ 0.44
KRT9P35527 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT9P35527 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT9P35527 AC012569.1-201ENST00000591191 1524 ntBASIC17.82■□□□□ 0.44
KRT9P35527 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 AP002414.2-201ENST00000591780 3365 ntBASIC17.82■□□□□ 0.44
KRT9P35527 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT9P35527 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT9P35527 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT9P35527 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT9P35527 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
KRT9P35527 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT9P35527 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT9P35527 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT9P35527 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
KRT9P35527 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT9P35527 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
KRT9P35527 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 ACTL9-202ENST00000612068 1252 ntBASIC17.81■□□□□ 0.44
KRT9P35527 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
KRT9P35527 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT9P35527 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KRT9P35527 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT9P35527 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms