Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCN1P35523 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCN1P35523 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 KLF4P1-201ENST00000412782 1185 ntBASIC18.56■□□□□ 0.56
CLCN1P35523 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCN1P35523 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCN1P35523 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCN1P35523 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCN1P35523 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCN1P35523 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN1P35523 AC148477.5-201ENST00000625164 1645 ntBASIC18.56■□□□□ 0.56
CLCN1P35523 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLCN1P35523 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN1P35523 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCN1P35523 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN1P35523 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN1P35523 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN1P35523 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 NUS1P2-201ENST00000417358 873 ntBASIC18.55■□□□□ 0.56
CLCN1P35523 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCN1P35523 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCN1P35523 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCN1P35523 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCN1P35523 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.55■□□□□ 0.56
CLCN1P35523 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLCN1P35523 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN1P35523 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 AC006504.5-208ENST00000588784 2401 ntBASIC18.54■□□□□ 0.56
CLCN1P35523 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLCN1P35523 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLCN1P35523 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 ABCD1P5-201ENST00000445663 754 ntBASIC18.54■□□□□ 0.56
CLCN1P35523 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 USP31-203ENST00000567975 2142 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 AC138894.3-201ENST00000603787 634 ntBASIC18.54■□□□□ 0.56
CLCN1P35523 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN1P35523 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN1P35523 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN1P35523 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN1P35523 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN1P35523 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms