Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 AC092933.1-201ENST00000393644 945 ntBASIC21.6■■□□□ 1.05
USP6P35125 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 RPL7P3-201ENST00000441388 714 ntBASIC21.6■■□□□ 1.05
USP6P35125 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.6■■□□□ 1.05
USP6P35125 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 FO681548.1-201ENST00000455617 1132 ntBASIC21.6■■□□□ 1.05
USP6P35125 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 KRT18P43-201ENST00000469825 1281 ntBASIC21.6■■□□□ 1.05
USP6P35125 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.6■■□□□ 1.05
USP6P35125 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
USP6P35125 AP000812.2-201ENST00000538934 718 ntBASIC21.6■■□□□ 1.05
USP6P35125 GNRHR2-203ENST00000581100 1187 ntBASIC21.6■■□□□ 1.05
USP6P35125 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.6■■□□□ 1.05
USP6P35125 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.6■■□□□ 1.05
USP6P35125 AL607033.1-201ENST00000623900 1599 ntBASIC21.6■■□□□ 1.05
USP6P35125 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6P35125 AC106820.2-201ENST00000563775 3264 ntBASIC21.6■■□□□ 1.05
USP6P35125 AL121723.1-201ENST00000445194 1519 ntBASIC21.6■■□□□ 1.05
USP6P35125 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.6■■□□□ 1.05
USP6P35125 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
USP6P35125 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6P35125 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
USP6P35125 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
USP6P35125 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6P35125 AC012441.1-201ENST00000446669 685 ntBASIC21.59■■□□□ 1.05
USP6P35125 AL355994.2-201ENST00000447882 704 ntBASIC21.59■■□□□ 1.05
USP6P35125 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.59■■□□□ 1.05
USP6P35125 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.59■■□□□ 1.05
USP6P35125 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6P35125 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 MIR4538-201ENST00000581377 78 ntBASIC21.59■■□□□ 1.05
USP6P35125 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 AC020763.4-201ENST00000623414 4170 ntBASIC21.59■■□□□ 1.05
USP6P35125 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
USP6P35125 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6P35125 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.59■■□□□ 1.05
USP6P35125 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
USP6P35125 TUBB1P2-201ENST00000422712 1306 ntBASIC21.58■■□□□ 1.05
USP6P35125 TUBB1P1-201ENST00000503144 1300 ntBASIC21.58■■□□□ 1.05
USP6P35125 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
USP6P35125 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.58■■□□□ 1.05
USP6P35125 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
USP6P35125 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 ACTBP11-201ENST00000436287 1126 ntBASIC21.58■■□□□ 1.05
USP6P35125 CSF2RBP1-201ENST00000447905 391 ntBASIC21.58■■□□□ 1.05
USP6P35125 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.58■■□□□ 1.05
USP6P35125 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.58■■□□□ 1.05
USP6P35125 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
USP6P35125 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
USP6P35125 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USP6P35125 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.58■■□□□ 1.04
USP6P35125 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6P35125 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
USP6P35125 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.58■■□□□ 1.04
USP6P35125 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6P35125 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.58■■□□□ 1.04
USP6P35125 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
USP6P35125 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
USP6P35125 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
USP6P35125 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 AC106886.4-201ENST00000623557 2502 ntBASIC21.57■■□□□ 1.04
USP6P35125 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 FTH1P14-201ENST00000482930 551 ntBASIC21.57■■□□□ 1.04
USP6P35125 RNA5SP412-201ENST00000516234 123 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms