Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.06■□□□□ 0.16
VARSP26640 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.06■□□□□ 0.16
VARSP26640 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VARSP26640 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VARSP26640 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VARSP26640 BCAR1-209ENST00000546196 1340 ntBASIC16.05■□□□□ 0.16
VARSP26640 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 TSPY26P-202ENST00000565928 3884 ntBASIC16.05■□□□□ 0.16
VARSP26640 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 AL645939.2-201ENST00000427340 991 ntBASIC16.05■□□□□ 0.16
VARSP26640 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.05■□□□□ 0.16
VARSP26640 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.05■□□□□ 0.16
VARSP26640 AL031432.2-201ENST00000566714 459 ntBASIC16.05■□□□□ 0.16
VARSP26640 AL928711.1-201ENST00000570165 459 ntBASIC16.05■□□□□ 0.16
VARSP26640 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 AC023141.13-201ENST00000604991 943 ntBASIC16.05■□□□□ 0.16
VARSP26640 AL596442.2-201ENST00000610240 980 ntBASIC16.05■□□□□ 0.16
VARSP26640 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
VARSP26640 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.05■□□□□ 0.16
VARSP26640 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VARSP26640 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
VARSP26640 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VARSP26640 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VARSP26640 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VARSP26640 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VARSP26640 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
VARSP26640 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 CYMP-203ENST00000474680 1263 ntBASIC16.04■□□□□ 0.16
VARSP26640 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
VARSP26640 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.04■□□□□ 0.16
VARSP26640 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 RFPL4AP1-201ENST00000530883 850 ntBASIC16.04■□□□□ 0.16
VARSP26640 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.04■□□□□ 0.16
VARSP26640 AC092364.2-202ENST00000597012 1073 ntBASIC16.04■□□□□ 0.16
VARSP26640 AC004877.2-201ENST00000623941 599 ntBASIC16.04■□□□□ 0.16
VARSP26640 GPAA1P2-202ENST00000606848 1787 ntBASIC16.04■□□□□ 0.16
VARSP26640 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms