Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.26■□□□□ 0.03
CHMP24386 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP24386 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 HCG4-201ENST00000418983 998 ntBASIC15.26■□□□□ 0.03
CHMP24386 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.26■□□□□ 0.03
CHMP24386 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.26■□□□□ 0.03
CHMP24386 AL031432.2-201ENST00000566714 459 ntBASIC15.26■□□□□ 0.03
CHMP24386 AL928711.1-201ENST00000570165 459 ntBASIC15.26■□□□□ 0.03
CHMP24386 MIR4515-201ENST00000584082 81 ntBASIC15.26■□□□□ 0.03
CHMP24386 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP24386 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP24386 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CHMP24386 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP24386 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.25■□□□□ 0.03
CHMP24386 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
CHMP24386 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 AC144831.1-201ENST00000573312 2656 ntBASIC15.25■□□□□ 0.03
CHMP24386 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 DBET-201ENST00000630918 3363 ntBASIC15.25■□□□□ 0.03
CHMP24386 AL031731.1-201ENST00000642131 2094 ntBASIC15.25■□□□□ 0.03
CHMP24386 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.25■□□□□ 0.03
CHMP24386 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 MKNK2P1-201ENST00000437526 628 ntBASIC15.25■□□□□ 0.03
CHMP24386 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.25■□□□□ 0.03
CHMP24386 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.25■□□□□ 0.03
CHMP24386 AC010327.4-202ENST00000591484 748 ntBASIC15.25■□□□□ 0.03
CHMP24386 C20orf181-201ENST00000623918 480 ntBASIC15.25■□□□□ 0.03
CHMP24386 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP24386 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CHMP24386 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP24386 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP24386 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHMP24386 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CHMP24386 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP24386 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP24386 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP24386 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP24386 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP24386 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP24386 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP24386 AC112482.1-201ENST00000492080 688 ntBASIC15.24■□□□□ 0.03
CHMP24386 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms