Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.97■□□□□ 0.47
ATP4AP20648 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATP4AP20648 AC009118.2-201ENST00000613275 655 ntBASIC17.97■□□□□ 0.47
ATP4AP20648 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ATP4AP20648 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP4AP20648 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATP4AP20648 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATP4AP20648 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.97■□□□□ 0.47
ATP4AP20648 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATP4AP20648 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ATP4AP20648 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP4AP20648 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP4AP20648 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP4AP20648 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP4AP20648 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.96■□□□□ 0.47
ATP4AP20648 RN7SL618P-201ENST00000477850 296 ntBASIC17.96■□□□□ 0.47
ATP4AP20648 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.96■□□□□ 0.47
ATP4AP20648 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATP4AP20648 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.96■□□□□ 0.47
ATP4AP20648 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.96■□□□□ 0.47
ATP4AP20648 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATP4AP20648 PCDHA14-201ENST00000506751 2298 ntBASIC17.96■□□□□ 0.47
ATP4AP20648 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.96■□□□□ 0.46
ATP4AP20648 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ATP4AP20648 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATP4AP20648 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.96■□□□□ 0.46
ATP4AP20648 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
ATP4AP20648 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP4AP20648 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.95■□□□□ 0.46
ATP4AP20648 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.95■□□□□ 0.46
ATP4AP20648 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 AF228730.6-201ENST00000641497 218 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 AC084121.3-201ENST00000641716 218 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 AC105233.6-201ENST00000642093 218 ntBASIC17.95■□□□□ 0.46
ATP4AP20648 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
ATP4AP20648 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.95■□□□□ 0.46
ATP4AP20648 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATP4AP20648 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
ATP4AP20648 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP4AP20648 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP4AP20648 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP4AP20648 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP4AP20648 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATP4AP20648 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.94■□□□□ 0.46
ATP4AP20648 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms