Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 AC092552.1-201ENST00000547243 906 ntBASIC15.23■□□□□ 0.03
CCL4P13236 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL4P13236 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.23■□□□□ 0.03
CCL4P13236 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL4P13236 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL4P13236 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL4P13236 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCL4P13236 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 AC004987.2-201ENST00000395959 1148 ntBASIC15.22■□□□□ 0.03
CCL4P13236 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL4P13236 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 RN7SL399P-201ENST00000471648 279 ntBASIC15.22■□□□□ 0.03
CCL4P13236 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL4P13236 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCL4P13236 AC008735.3-201ENST00000596646 500 ntBASIC15.22■□□□□ 0.03
CCL4P13236 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCL4P13236 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL4P13236 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCL4P13236 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
CCL4P13236 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CCL4P13236 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL4P13236 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL4P13236 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL4P13236 CROCCP4-201ENST00000457096 498 ntBASIC15.21■□□□□ 0.03
CCL4P13236 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms