Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP3P12645 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.64■□□□□ 0.57
BMP3P12645 AC093004.1-201ENST00000508850 424 ntBASIC18.64■□□□□ 0.57
BMP3P12645 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP3P12645 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP3P12645 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.64■□□□□ 0.57
BMP3P12645 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
BMP3P12645 AL596325.1-201ENST00000563991 1082 ntBASIC18.64■□□□□ 0.57
BMP3P12645 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP3P12645 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP3P12645 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP3P12645 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.64■□□□□ 0.57
BMP3P12645 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP3P12645 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP3P12645 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP3P12645 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
BMP3P12645 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 EEF1DP4-201ENST00000446006 880 ntBASIC18.63■□□□□ 0.57
BMP3P12645 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 GAPDHP21-201ENST00000450301 1010 ntBASIC18.63■□□□□ 0.57
BMP3P12645 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 RN7SL692P-201ENST00000464677 288 ntBASIC18.63■□□□□ 0.57
BMP3P12645 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 AC140912.1-201ENST00000577171 1054 ntBASIC18.63■□□□□ 0.57
BMP3P12645 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.63■□□□□ 0.57
BMP3P12645 AC074044.1-201ENST00000609673 707 ntBASIC18.63■□□□□ 0.57
BMP3P12645 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
BMP3P12645 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 KRT8P37-201ENST00000451609 1420 ntBASIC18.63■□□□□ 0.57
BMP3P12645 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BMP3P12645 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BMP3P12645 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.63■□□□□ 0.57
BMP3P12645 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
BMP3P12645 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BMP3P12645 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.62■□□□□ 0.57
BMP3P12645 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.62■□□□□ 0.57
BMP3P12645 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 AL589987.1-201ENST00000453380 819 ntBASIC18.62■□□□□ 0.57
BMP3P12645 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.62■□□□□ 0.57
BMP3P12645 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.62■□□□□ 0.57
BMP3P12645 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BMP3P12645 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 AL391825.1-201ENST00000457671 1364 ntBASIC18.62■□□□□ 0.57
BMP3P12645 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 BNIP3P1-202ENST00000550043 1585 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms