Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.91■□□□□ 0.14
PCNAP12004 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCNAP12004 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
PCNAP12004 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
PCNAP12004 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
PCNAP12004 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCNAP12004 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCNAP12004 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCNAP12004 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCNAP12004 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 AC126755.1-201ENST00000525846 6405 ntBASIC15.9■□□□□ 0.14
PCNAP12004 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.9■□□□□ 0.14
PCNAP12004 MED15P5-201ENST00000423150 992 ntBASIC15.9■□□□□ 0.14
PCNAP12004 POU5F1P6-201ENST00000466990 990 ntBASIC15.9■□□□□ 0.14
PCNAP12004 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.9■□□□□ 0.14
PCNAP12004 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.9■□□□□ 0.14
PCNAP12004 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.9■□□□□ 0.14
PCNAP12004 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PCNAP12004 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.9■□□□□ 0.14
PCNAP12004 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCNAP12004 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.9■□□□□ 0.14
PCNAP12004 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCNAP12004 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.89■□□□□ 0.13
PCNAP12004 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 NORAD-201ENST00000565493 5339 ntBASIC15.89■□□□□ 0.13
PCNAP12004 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PCNAP12004 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 AC144831.1-201ENST00000573312 2656 ntBASIC15.89■□□□□ 0.13
PCNAP12004 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.89■□□□□ 0.13
PCNAP12004 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.89■□□□□ 0.13
PCNAP12004 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.89■□□□□ 0.13
PCNAP12004 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCNAP12004 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 RNA5SP416-201ENST00000516838 111 ntBASIC15.89■□□□□ 0.13
PCNAP12004 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.89■□□□□ 0.13
PCNAP12004 KRT19P2-202ENST00000557173 1012 ntBASIC15.89■□□□□ 0.13
PCNAP12004 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCNAP12004 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.89■□□□□ 0.13
PCNAP12004 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCNAP12004 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms