Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
UBCP0CG48 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.32□□□□□ -0.12
UBCP0CG48 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 AC105339.3-201ENST00000560043 636 ntBASIC14.32□□□□□ -0.12
UBCP0CG48 MIR4515-201ENST00000584082 81 ntBASIC14.32□□□□□ -0.12
UBCP0CG48 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.32□□□□□ -0.12
UBCP0CG48 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.32□□□□□ -0.12
UBCP0CG48 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
UBCP0CG48 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBCP0CG48 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.32□□□□□ -0.12
UBCP0CG48 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBCP0CG48 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBCP0CG48 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 RPS2P28-201ENST00000314255 741 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.31□□□□□ -0.12
UBCP0CG48 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.31□□□□□ -0.12
UBCP0CG48 RNU1-129P-201ENST00000384064 167 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.31□□□□□ -0.12
UBCP0CG48 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 RNPS1P1-201ENST00000507437 918 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.31□□□□□ -0.12
UBCP0CG48 U1.21-201ENST00000580816 167 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.31□□□□□ -0.12
UBCP0CG48 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.31□□□□□ -0.12
UBCP0CG48 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 IFNL4P1-201ENST00000607083 540 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBCP0CG48 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBCP0CG48 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 TCAF2P1-201ENST00000291129 2421 ntBASIC14.31□□□□□ -0.12
UBCP0CG48 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBCP0CG48 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBCP0CG48 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.3□□□□□ -0.12
UBCP0CG48 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBCP0CG48 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms