Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
FAM228BP0C875 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.33■□□□□ 0.37
FAM228BP0C875 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 AC023824.1-201ENST00000562945 2975 ntBASIC17.33■□□□□ 0.37
FAM228BP0C875 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.33■□□□□ 0.37
FAM228BP0C875 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM228BP0C875 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
FAM228BP0C875 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 HLA-A-201ENST00000376802 1334 ntBASIC17.33■□□□□ 0.36
FAM228BP0C875 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
FAM228BP0C875 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
FAM228BP0C875 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 AC079776.4-201ENST00000511039 504 ntBASIC17.33■□□□□ 0.36
FAM228BP0C875 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FAM228BP0C875 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM228BP0C875 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM228BP0C875 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM228BP0C875 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.33■□□□□ 0.36
FAM228BP0C875 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 AC007064.4-201ENST00000637740 555 ntBASIC17.33■□□□□ 0.36
FAM228BP0C875 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FAM228BP0C875 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FAM228BP0C875 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.33■□□□□ 0.36
FAM228BP0C875 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM228BP0C875 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FAM228BP0C875 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM228BP0C875 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM228BP0C875 AC245100.5-201ENST00000452108 331 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM228BP0C875 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM228BP0C875 AC018845.2-201ENST00000568326 409 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 AC002347.1-201ENST00000569543 541 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.32■□□□□ 0.36
FAM228BP0C875 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 AL365330.1-201ENST00000607459 531 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 AC004877.2-201ENST00000623941 599 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM228BP0C875 AC020658.6-201ENST00000623564 1870 ntBASIC17.32■□□□□ 0.36
FAM228BP0C875 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM228BP0C875 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM228BP0C875 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.31■□□□□ 0.36
FAM228BP0C875 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FAM228BP0C875 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM228BP0C875 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms