Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CYP3A4P08684 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.16■□□□□ 0.5
CYP3A4P08684 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CYP3A4P08684 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP3A4P08684 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CYP3A4P08684 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP3A4P08684 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.15■□□□□ 0.5
CYP3A4P08684 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.15■□□□□ 0.5
CYP3A4P08684 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CYP3A4P08684 FAM207CP-201ENST00000443486 507 ntBASIC18.15■□□□□ 0.5
CYP3A4P08684 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CYP3A4P08684 SDHAP3-202ENST00000515467 728 ntBASIC18.15■□□□□ 0.5
CYP3A4P08684 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.15■□□□□ 0.5
CYP3A4P08684 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.15■□□□□ 0.5
CYP3A4P08684 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.15■□□□□ 0.5
CYP3A4P08684 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CYP3A4P08684 AC025048.3-201ENST00000590609 569 ntBASIC18.15■□□□□ 0.5
CYP3A4P08684 AC092364.2-202ENST00000597012 1073 ntBASIC18.15■□□□□ 0.5
CYP3A4P08684 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP3A4P08684 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.15■□□□□ 0.5
CYP3A4P08684 AC005702.4-201ENST00000618393 416 ntBASIC18.15■□□□□ 0.5
CYP3A4P08684 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.15■□□□□ 0.5
CYP3A4P08684 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP3A4P08684 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CYP3A4P08684 PCDH8P1-201ENST00000428983 2773 ntBASIC18.14■□□□□ 0.5
CYP3A4P08684 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
CYP3A4P08684 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CYP3A4P08684 REXO1L1P-202ENST00000608646 1974 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CYP3A4P08684 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.14■□□□□ 0.49
CYP3A4P08684 AC114501.2-201ENST00000439631 535 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 PHKG1P2-201ENST00000457537 863 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.14■□□□□ 0.49
CYP3A4P08684 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 AC044860.1-202ENST00000559481 777 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 MIR4745-201ENST00000577608 62 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 RN7SL204P-201ENST00000582831 262 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.14■□□□□ 0.49
CYP3A4P08684 AC004840.1-201ENST00000636359 365 ntBASIC18.14■□□□□ 0.49
CYP3A4P08684 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CYP3A4P08684 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.14■□□□□ 0.49
CYP3A4P08684 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP3A4P08684 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CYP3A4P08684 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP3A4P08684 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP3A4P08684 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CYP3A4P08684 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms