Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AP002383.4-201ENST00000442518 975 ntBASIC13.55□□□□□ -0.24
CTSDP07339 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 AC091076.1-201ENST00000610741 619 ntBASIC13.55□□□□□ -0.24
CTSDP07339 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 AC138035.3-201ENST00000622706 2791 ntBASIC13.55□□□□□ -0.24
CTSDP07339 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.55□□□□□ -0.24
CTSDP07339 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CTSDP07339 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 AP003680.1-201ENST00000598970 3660 ntBASIC13.54□□□□□ -0.24
CTSDP07339 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CTSDP07339 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.54□□□□□ -0.24
CTSDP07339 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 PTCHD3P3-201ENST00000403073 906 ntBASIC13.54□□□□□ -0.24
CTSDP07339 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.54□□□□□ -0.24
CTSDP07339 AC107918.2-201ENST00000530817 355 ntBASIC13.54□□□□□ -0.24
CTSDP07339 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CTSDP07339 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 AC139887.3-201ENST00000568585 713 ntBASIC13.54□□□□□ -0.24
CTSDP07339 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 AL591684.3-201ENST00000605187 298 ntBASIC13.54□□□□□ -0.24
CTSDP07339 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.54□□□□□ -0.24
CTSDP07339 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 AL139288.1-201ENST00000623748 933 ntBASIC13.54□□□□□ -0.24
CTSDP07339 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.54□□□□□ -0.24
CTSDP07339 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CTSDP07339 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.54□□□□□ -0.24
CTSDP07339 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CTSDP07339 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CTSDP07339 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CTSDP07339 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 HAUS4P1-201ENST00000406739 1145 ntBASIC13.53□□□□□ -0.24
CTSDP07339 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CTSDP07339 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.53□□□□□ -0.24
CTSDP07339 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms