Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
LDLRP01130 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
LDLRP01130 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LDLRP01130 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRP01130 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRP01130 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRP01130 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.8■□□□□ 0.12
LDLRP01130 HLA-J-203ENST00000494367 1087 ntBASIC15.8■□□□□ 0.12
LDLRP01130 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRP01130 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRP01130 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.8■□□□□ 0.12
LDLRP01130 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 ELL2P1-201ENST00000413990 1906 ntBASIC15.8■□□□□ 0.12
LDLRP01130 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRP01130 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LDLRP01130 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDLRP01130 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDLRP01130 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 AC010491.1-201ENST00000563101 2797 ntBASIC15.79■□□□□ 0.12
LDLRP01130 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
LDLRP01130 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.79■□□□□ 0.12
LDLRP01130 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.79■□□□□ 0.12
LDLRP01130 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.79■□□□□ 0.12
LDLRP01130 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.79■□□□□ 0.12
LDLRP01130 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LDLRP01130 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRP01130 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRP01130 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 AL021920.2-201ENST00000624828 1351 ntBASIC15.78■□□□□ 0.12
LDLRP01130 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.78■□□□□ 0.12
LDLRP01130 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.78■□□□□ 0.12
LDLRP01130 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LDLRP01130 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.78■□□□□ 0.12
LDLRP01130 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDLRP01130 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LDLRP01130 AL096865.1-201ENST00000606796 927 ntBASIC15.78■□□□□ 0.12
LDLRP01130 AL078644.1-201ENST00000609881 752 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms