Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TOP3BO95985 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP3BO95985 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.71■□□□□ 0.27
TOP3BO95985 MIR6752-201ENST00000618442 71 ntBASIC16.71■□□□□ 0.27
TOP3BO95985 AL390754.1-201ENST00000619088 582 ntBASIC16.71■□□□□ 0.27
TOP3BO95985 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP3BO95985 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP3BO95985 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP3BO95985 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP3BO95985 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP3BO95985 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
TOP3BO95985 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TOP3BO95985 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TOP3BO95985 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.71■□□□□ 0.26
TOP3BO95985 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TOP3BO95985 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP3BO95985 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 TREML5P-201ENST00000421694 576 ntBASIC16.7■□□□□ 0.26
TOP3BO95985 FAM58DP-201ENST00000428076 619 ntBASIC16.7■□□□□ 0.26
TOP3BO95985 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP3BO95985 CXCL1P1-201ENST00000502804 216 ntBASIC16.7■□□□□ 0.26
TOP3BO95985 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP3BO95985 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TOP3BO95985 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.7■□□□□ 0.26
TOP3BO95985 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP3BO95985 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TOP3BO95985 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP3BO95985 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.7■□□□□ 0.26
TOP3BO95985 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.7■□□□□ 0.26
TOP3BO95985 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.69■□□□□ 0.26
TOP3BO95985 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP3BO95985 FAM207CP-201ENST00000443486 507 ntBASIC16.69■□□□□ 0.26
TOP3BO95985 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 CRB3P1-201ENST00000449338 276 ntBASIC16.69■□□□□ 0.26
TOP3BO95985 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP3BO95985 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP3BO95985 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP3BO95985 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP3BO95985 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 AL596087.1-201ENST00000400979 1969 ntBASIC16.69■□□□□ 0.26
TOP3BO95985 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP3BO95985 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 GGT3P-204ENST00000453783 1664 ntBASIC16.69■□□□□ 0.26
TOP3BO95985 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP3BO95985 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TOP3BO95985 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP3BO95985 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP3BO95985 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TOP3BO95985 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms