Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SIX6O95475 LINC01144-201ENST00000626198 1710 ntBASIC13.67□□□□□ -0.22
SIX6O95475 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.67□□□□□ -0.22
SIX6O95475 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.67□□□□□ -0.22
SIX6O95475 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.67□□□□□ -0.22
SIX6O95475 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.67□□□□□ -0.22
SIX6O95475 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
SIX6O95475 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SIX6O95475 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SIX6O95475 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 AC041040.2-201ENST00000622926 2899 ntBASIC13.66□□□□□ -0.22
SIX6O95475 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.66□□□□□ -0.22
SIX6O95475 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SIX6O95475 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SIX6O95475 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SIX6O95475 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 AC233702.5-201ENST00000584107 538 ntBASIC13.66□□□□□ -0.22
SIX6O95475 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.66□□□□□ -0.22
SIX6O95475 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SIX6O95475 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 AL390755.1-201ENST00000623716 2027 ntBASIC13.66□□□□□ -0.22
SIX6O95475 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SIX6O95475 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.66□□□□□ -0.22
SIX6O95475 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SIX6O95475 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SIX6O95475 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.65□□□□□ -0.22
SIX6O95475 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms