Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MIR4492-201ENST00000581627 80 ntBASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MPDU1-223ENST00000582151 728 ntBASIC11.87□□□□□ -0.51
TNFRSF6BO95407 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 IGHV3-41-201ENST00000613121 348 ntBASIC11.87□□□□□ -0.51
TNFRSF6BO95407 PGM5P2-202ENST00000637225 1043 ntBASIC11.87□□□□□ -0.51
TNFRSF6BO95407 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TNFRSF6BO95407 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AC112907.2-201ENST00000448639 330 ntBASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AC090616.6-201ENST00000582640 721 ntBASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TNFRSF6BO95407 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms