Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 BASP1P1-201ENST00000430708 665 ntBASIC17.15■□□□□ 0.34
RTN3O95197 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN3O95197 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 IGHV3-42-201ENST00000520410 361 ntBASIC17.15■□□□□ 0.34
RTN3O95197 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN3O95197 AL390955.2-201ENST00000603032 514 ntBASIC17.15■□□□□ 0.34
RTN3O95197 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN3O95197 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTN3O95197 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTN3O95197 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.14■□□□□ 0.34
RTN3O95197 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTN3O95197 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 LINC02228-204ENST00000642115 2962 ntBASIC17.14■□□□□ 0.33
RTN3O95197 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.14■□□□□ 0.33
RTN3O95197 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.14■□□□□ 0.33
RTN3O95197 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.14■□□□□ 0.33
RTN3O95197 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.14■□□□□ 0.33
RTN3O95197 SPCS2P1-201ENST00000561636 679 ntBASIC17.14■□□□□ 0.33
RTN3O95197 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 AL096865.1-201ENST00000606796 927 ntBASIC17.14■□□□□ 0.33
RTN3O95197 AL365330.1-201ENST00000607459 531 ntBASIC17.14■□□□□ 0.33
RTN3O95197 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.14■□□□□ 0.33
RTN3O95197 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.14■□□□□ 0.33
RTN3O95197 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RTN3O95197 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN3O95197 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN3O95197 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.14■□□□□ 0.33
RTN3O95197 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RTN3O95197 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.13■□□□□ 0.33
RTN3O95197 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RTN3O95197 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTN3O95197 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RTN3O95197 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RTN3O95197 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.13■□□□□ 0.33
RTN3O95197 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.13■□□□□ 0.33
RTN3O95197 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTN3O95197 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 AC097493.3-201ENST00000509725 367 ntBASIC17.13■□□□□ 0.33
RTN3O95197 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.13■□□□□ 0.33
RTN3O95197 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RTN3O95197 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.13■□□□□ 0.33
RTN3O95197 AC061975.2-201ENST00000581722 295 ntBASIC17.13■□□□□ 0.33
RTN3O95197 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTN3O95197 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 AC073592.8-201ENST00000624126 511 ntBASIC17.13■□□□□ 0.33
RTN3O95197 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTN3O95197 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RTN3O95197 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms