Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDKL5O76039 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.91■□□□□ 0.62
CDKL5O76039 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 AC008677.1-201ENST00000519230 1561 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDKL5O76039 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.9■□□□□ 0.62
CDKL5O76039 AC142381.1-201ENST00000426099 345 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 SPCS2P4-201ENST00000436160 681 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 TIMM8BP1-201ENST00000452384 211 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 KRT8P48-201ENST00000515599 1220 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 AC005829.1-201ENST00000570002 483 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.9■□□□□ 0.62
CDKL5O76039 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKL5O76039 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.9■□□□□ 0.62
CDKL5O76039 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 ELL2P1-201ENST00000413990 1906 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.9■□□□□ 0.62
CDKL5O76039 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDKL5O76039 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKL5O76039 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDKL5O76039 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
CDKL5O76039 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDKL5O76039 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 AC112504.1-201ENST00000623415 1841 ntBASIC18.89■□□□□ 0.61
CDKL5O76039 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 AC008894.3-201ENST00000624324 3103 ntBASIC18.89■□□□□ 0.61
CDKL5O76039 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKL5O76039 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKL5O76039 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKL5O76039 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.89■□□□□ 0.61
CDKL5O76039 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CDKL5O76039 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDKL5O76039 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 AC010491.1-201ENST00000563101 2797 ntBASIC18.89■□□□□ 0.61
CDKL5O76039 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKL5O76039 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDKL5O76039 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 FOXO1B-201ENST00000504678 1527 ntBASIC18.89■□□□□ 0.61
CDKL5O76039 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDKL5O76039 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKL5O76039 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL5O76039 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 MIR346-201ENST00000362234 95 ntBASIC18.88■□□□□ 0.61
CDKL5O76039 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL5O76039 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.88■□□□□ 0.61
CDKL5O76039 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.88■□□□□ 0.61
CDKL5O76039 AP000842.3-202ENST00000569238 1080 ntBASIC18.88■□□□□ 0.61
CDKL5O76039 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.88■□□□□ 0.61
CDKL5O76039 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKL5O76039 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKL5O76039 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKL5O76039 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms