Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC02199-201ENST00000506655 2702 ntBASIC7.1□□□□□ -1.27
USH2AO75445 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 AC004522.1-201ENST00000419978 654 ntBASIC7.1□□□□□ -1.27
USH2AO75445 AL133466.1-201ENST00000447582 150 ntBASIC7.1□□□□□ -1.27
USH2AO75445 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 GGT4P-201ENST00000623672 1708 ntBASIC7.1□□□□□ -1.27
USH2AO75445 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 RAC2-202ENST00000401529 569 ntTSL 4 BASIC7.09□□□□□ -1.27
USH2AO75445 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 PP12613-201ENST00000424958 2230 ntBASIC7.09□□□□□ -1.27
USH2AO75445 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 DNM1P30-201ENST00000563586 452 ntBASIC7.09□□□□□ -1.27
USH2AO75445 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC7.09□□□□□ -1.27
USH2AO75445 AC024267.1-201ENST00000582320 895 ntBASIC7.09□□□□□ -1.27
USH2AO75445 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 AC092171.5-201ENST00000608012 942 ntBASIC7.09□□□□□ -1.27
USH2AO75445 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 RPS15-201ENST00000233609 534 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC7.09□□□□□ -1.27
USH2AO75445 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 RPS15-202ENST00000585665 467 ntTSL 3 BASIC7.09□□□□□ -1.27
USH2AO75445 RPS15-205ENST00000586686 562 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 FTLP5-201ENST00000586853 534 ntBASIC7.09□□□□□ -1.27
USH2AO75445 RPS15-208ENST00000591804 711 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 AC087045.2-201ENST00000606279 1003 ntBASIC7.09□□□□□ -1.27
USH2AO75445 COX6A1P2-201ENST00000620597 330 ntBASIC7.09□□□□□ -1.27
USH2AO75445 AC100757.4-201ENST00000626934 759 ntBASIC7.09□□□□□ -1.27
USH2AO75445 AL645728.2-202ENST00000641679 227 ntBASIC7.09□□□□□ -1.27
USH2AO75445 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 RPL18P13-201ENST00000478088 569 ntBASIC7.09□□□□□ -1.27
USH2AO75445 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 AC005730.2-201ENST00000564549 1184 ntBASIC7.09□□□□□ -1.27
USH2AO75445 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 AC007881.3-201ENST00000608897 607 ntBASIC7.09□□□□□ -1.27
USH2AO75445 AC007663.3-201ENST00000609632 465 ntBASIC7.09□□□□□ -1.27
USH2AO75445 AC009053.2-201ENST00000563701 2365 ntBASIC7.09□□□□□ -1.27
USH2AO75445 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC7.09□□□□□ -1.27
USH2AO75445 AC006277.1-201ENST00000624348 1610 ntBASIC7.09□□□□□ -1.27
USH2AO75445 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC7.09□□□□□ -1.27
USH2AO75445 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USH2AO75445 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC7.09□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms