Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM3O75382 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM3O75382 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM3O75382 AC026120.1-201ENST00000611536 926 ntBASIC15.23■□□□□ 0.03
TRIM3O75382 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM3O75382 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.22■□□□□ 0.03
TRIM3O75382 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM3O75382 TFAMP1-201ENST00000412727 736 ntBASIC15.22■□□□□ 0.03
TRIM3O75382 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM3O75382 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM3O75382 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 AC022145.2-201ENST00000598203 171 ntBASIC15.22■□□□□ 0.03
TRIM3O75382 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 TSPY26P-202ENST00000565928 3884 ntBASIC15.22■□□□□ 0.03
TRIM3O75382 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM3O75382 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM3O75382 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM3O75382 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM3O75382 RNF216P1-203ENST00000404404 2427 ntBASIC15.22■□□□□ 0.03
TRIM3O75382 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 AC004461.1-201ENST00000412461 403 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 RN7SL589P-201ENST00000481268 310 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 KRT8P48-201ENST00000515599 1220 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRIM3O75382 AL135744.1-201ENST00000565098 629 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TRIM3O75382 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM3O75382 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 AC021097.1-201ENST00000607902 574 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms