Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH16O75309 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH16O75309 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH16O75309 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 MIR3652-201ENST00000579335 131 ntBASIC16.47■□□□□ 0.23
CDH16O75309 AC092119.3-201ENST00000612618 583 ntBASIC16.47■□□□□ 0.23
CDH16O75309 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 CICP13-201ENST00000422015 2789 ntBASIC16.47■□□□□ 0.23
CDH16O75309 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CDH16O75309 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH16O75309 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH16O75309 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH16O75309 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH16O75309 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH16O75309 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH16O75309 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CDH16O75309 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH16O75309 KRT18P56-201ENST00000507275 550 ntBASIC16.46■□□□□ 0.23
CDH16O75309 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH16O75309 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.46■□□□□ 0.23
CDH16O75309 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH16O75309 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH16O75309 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH16O75309 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH16O75309 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH16O75309 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDH16O75309 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDH16O75309 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.46■□□□□ 0.22
CDH16O75309 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH16O75309 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms