Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EXTL3O43909 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.59■□□□□ 0.41
EXTL3O43909 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.59■□□□□ 0.41
EXTL3O43909 AL139010.1-201ENST00000454878 894 ntBASIC17.59■□□□□ 0.41
EXTL3O43909 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.59■□□□□ 0.41
EXTL3O43909 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.59■□□□□ 0.41
EXTL3O43909 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.59■□□□□ 0.41
EXTL3O43909 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.59■□□□□ 0.41
EXTL3O43909 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.59■□□□□ 0.41
EXTL3O43909 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
EXTL3O43909 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EXTL3O43909 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.58■□□□□ 0.41
EXTL3O43909 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EXTL3O43909 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.58■□□□□ 0.41
EXTL3O43909 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXTL3O43909 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EXTL3O43909 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EXTL3O43909 AL691432.1-201ENST00000596308 1422 ntBASIC17.58■□□□□ 0.41
EXTL3O43909 AL035456.1-201ENST00000456064 1369 ntBASIC17.58■□□□□ 0.4
EXTL3O43909 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 TUBB3P1-201ENST00000405796 1332 ntBASIC17.58■□□□□ 0.4
EXTL3O43909 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
EXTL3O43909 AL035633.1-201ENST00000406139 838 ntBASIC17.58■□□□□ 0.4
EXTL3O43909 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 SPCS2P1-201ENST00000561636 679 ntBASIC17.58■□□□□ 0.4
EXTL3O43909 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.58■□□□□ 0.4
EXTL3O43909 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.58■□□□□ 0.4
EXTL3O43909 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.58■□□□□ 0.4
EXTL3O43909 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.58■□□□□ 0.4
EXTL3O43909 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.58■□□□□ 0.4
EXTL3O43909 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.58■□□□□ 0.4
EXTL3O43909 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
EXTL3O43909 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
EXTL3O43909 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.58■□□□□ 0.4
EXTL3O43909 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EXTL3O43909 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EXTL3O43909 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 AP001282.1-201ENST00000531301 1499 ntBASIC17.57■□□□□ 0.4
EXTL3O43909 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EXTL3O43909 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.57■□□□□ 0.4
EXTL3O43909 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.57■□□□□ 0.4
EXTL3O43909 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.57■□□□□ 0.4
EXTL3O43909 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
EXTL3O43909 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.57■□□□□ 0.4
EXTL3O43909 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.57■□□□□ 0.4
EXTL3O43909 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.57■□□□□ 0.4
EXTL3O43909 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.57■□□□□ 0.4
EXTL3O43909 RN7SL828P-201ENST00000607615 303 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms