Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AL353135.1-201ENST00000606729 504 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AC008735.5-201ENST00000623544 497 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AL662844.4-201ENST00000606367 2838 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF9O43307 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF9O43307 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ARHGEF9O43307 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF9O43307 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF9O43307 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ARHGEF9O43307 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 MTDHP5-201ENST00000598980 586 ntBASIC15.2■□□□□ 0.02
ARHGEF9O43307 LINC02084-201ENST00000606069 1096 ntBASIC15.2■□□□□ 0.02
ARHGEF9O43307 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF9O43307 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF9O43307 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 AC087386.2-201ENST00000623212 4637 ntBASIC15.19■□□□□ 0.02
ARHGEF9O43307 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 AL391256.1-201ENST00000443260 1855 ntBASIC15.19■□□□□ 0.02
ARHGEF9O43307 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 AP002414.1-201ENST00000391405 1147 ntBASIC15.19■□□□□ 0.02
ARHGEF9O43307 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 SART3-203ENST00000546611 1184 ntBASIC15.19■□□□□ 0.02
ARHGEF9O43307 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF9O43307 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF9O43307 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF9O43307 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms