Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
NACAE9PAV3 RPS2P28-201ENST00000314255 741 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 AC009947.1-201ENST00000444350 727 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.98□□□□□ -0.49
NACAE9PAV3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.98□□□□□ -0.49
NACAE9PAV3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 AC103702.1-201ENST00000548801 2630 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NACAE9PAV3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 MIR940-201ENST00000401276 94 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 CRYGEP-201ENST00000412192 528 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.98□□□□□ -0.49
NACAE9PAV3 AC013467.2-201ENST00000605472 835 ntBASIC11.98□□□□□ -0.49
NACAE9PAV3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NACAE9PAV3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NACAE9PAV3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.98□□□□□ -0.49
NACAE9PAV3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
NACAE9PAV3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NACAE9PAV3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NACAE9PAV3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.97□□□□□ -0.49
NACAE9PAV3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.97□□□□□ -0.49
NACAE9PAV3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.97□□□□□ -0.49
NACAE9PAV3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.97□□□□□ -0.49
NACAE9PAV3 AC040169.1-201ENST00000565382 521 ntBASIC11.97□□□□□ -0.49
NACAE9PAV3 AC002347.1-201ENST00000569543 541 ntBASIC11.97□□□□□ -0.49
NACAE9PAV3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.97□□□□□ -0.49
NACAE9PAV3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NACAE9PAV3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NACAE9PAV3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.97□□□□□ -0.49
NACAE9PAV3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.97□□□□□ -0.49
NACAE9PAV3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms