Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB4C9JG80 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 ALG1L5P-201ENST00000482043 771 ntBASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AC069335.1-201ENST00000489972 472 ntBASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AL513210.1-201ENST00000629608 234 ntBASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.34□□□□□ -0.11
NPIPB4C9JG80 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AC134407.2-201ENST00000625089 1978 ntBASIC14.34□□□□□ -0.11
NPIPB4C9JG80 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB4C9JG80 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.11
NPIPB4C9JG80 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AL592309.1-201ENST00000443127 649 ntBASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AC022145.2-201ENST00000598203 171 ntBASIC14.33□□□□□ -0.12
NPIPB4C9JG80 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AC105339.1-204ENST00000636249 355 ntBASIC14.33□□□□□ -0.12
NPIPB4C9JG80 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 AL162727.3-201ENST00000635661 2787 ntBASIC14.33□□□□□ -0.12
NPIPB4C9JG80 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB4C9JG80 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB4C9JG80 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms