Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
YJEFN3A6XGL0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
YJEFN3A6XGL0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
YJEFN3A6XGL0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 RPL37AP1-201ENST00000412502 279 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 AL079307.3-201ENST00000556114 283 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 AL589739.1-201ENST00000607720 493 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 AC073592.8-201ENST00000624126 511 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 LINC02199-201ENST00000506655 2702 ntBASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
YJEFN3A6XGL0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 HLA-V-204ENST00000476601 1289 ntBASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 AC027369.6-201ENST00000525520 931 ntBASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 CETN4P-206ENST00000642099 2168 ntBASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
YJEFN3A6XGL0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms