Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 GPS2P2-201ENST00000430745 888 ntBASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 AC046158.3-201ENST00000624947 2558 ntBASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CNN2P2-201ENST00000443536 909 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AC093724.1-201ENST00000448659 1027 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 CNN2P3-201ENST00000450201 906 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AC027307.2-201ENST00000591252 911 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 LINC02084-201ENST00000606069 1096 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AL136317.3-201ENST00000618497 906 ntBASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPDC1A2A3K4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 KRT18P34-201ENST00000488218 1270 ntBASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC067863.1-201ENST00000494933 530 ntBASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 SLC25A39P2-201ENST00000537614 270 ntBASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AP001059.3-201ENST00000619053 235 ntBASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC008267.7-201ENST00000624570 1194 ntBASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPDC1A2A3K4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 U82695.1-201ENST00000635752 1889 ntBASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms