Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AC106795.1-205ENST00000512851 1056 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AL591684.3-201ENST00000605187 298 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AC004706.3-202ENST00000621574 984 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AL161772.1-201ENST00000610494 4412 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 AC005332.1-201ENST00000577698 1310 ntBASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DUXBA0A1W2PPF3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AC007292.2-201ENST00000593524 1812 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 PTCHD3P3-201ENST00000403073 906 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 RBM17P3-201ENST00000417687 1192 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AP002383.4-201ENST00000442518 975 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 DUX4L26-201ENST00000489078 1255 ntBASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DUXBA0A1W2PPF3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms