Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 AC010319.3-201ENST00000597028 470 ntBASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 CLK3P2-201ENST00000427566 1453 ntBASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA1Q9Y5H4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ACTBP11-201ENST00000436287 1126 ntBASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AC233724.13-201ENST00000598383 410 ntBASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 AC141586.5-201ENST00000624546 2050 ntBASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA1Q9Y5H4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 CDC14C-201ENST00000428251 1719 ntBASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 BNIP3P42-201ENST00000454982 569 ntBASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA1Q9Y5H4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms