Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 TOP3BP1-201ENST00000420768 1380 ntBASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 AC243591.1-201ENST00000452967 1364 ntBASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB1Q9Y5G3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 FAAHP1-202ENST00000446499 1238 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 KRT17P6-201ENST00000453795 1220 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MINOS1P3-201ENST00000457048 203 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 UNC93B7-201ENST00000509439 705 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PCGF3-213ENST00000620529 1899 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AC106881.1-201ENST00000605849 3329 ntBASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB1Q9Y5G3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 TSSC2-201ENST00000450217 709 ntBASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 AC010654.1-201ENST00000615722 808 ntBASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB1Q9Y5G3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.96□□□□□ -0.02
PCDHGB1Q9Y5G3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.96□□□□□ -0.02
PCDHGB1Q9Y5G3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms