Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AL365330.1-201ENST00000607459 531 ntBASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AC007541.1-201ENST00000570282 1469 ntBASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
CTDP1Q9Y5B0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 GGT3P-204ENST00000453783 1664 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 BTBD7P1-201ENST00000447253 1453 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 AP005018.1-201ENST00000525475 301 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 AL132655.2-201ENST00000596276 594 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 MIR6069-201ENST00000620069 79 ntBASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDP1Q9Y5B0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTDP1Q9Y5B0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms