Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ELK2BP-201ENST00000415014 1224 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 KRT18P27-201ENST00000427733 1299 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PAWRP1-201ENST00000451083 565 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AP002469.2-201ENST00000531724 424 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 CICP4-201ENST00000447359 2812 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AC023908.3-201ENST00000564211 3047 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AC068587.6-202ENST00000641839 5619 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AC073621.1-201ENST00000392730 636 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AL031284.1-201ENST00000419297 478 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 AC104692.2-201ENST00000603054 253 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 FAM215A-202ENST00000632077 792 ntBASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
HHLA3Q9XRX5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.96□□□□□ -0.5
HHLA3Q9XRX5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms